Plotting

Visualization helpers for trajectories, reconstructions, zone features, and cell–cell interactions.

plot.disp_trajectory

plot.disp_kde_scatter

Reconstruction plot w/ density

plot.disp_heatmap

plot.disp_stacked_dynamics

plot.disp_spatial_latents

plot.disp_joint_logfc

Plot joint upregulated genes (positive Y) & metabolites (negative Y) across zones.

plot.summarize_cell_interaction

Compute cluster-wise summary of cell-cell interactions

plot.netVisual_circle

# Reference: https://github.com/Starlitnightly/omicverse